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17/03/08 New release: 8.6
  • Direct login into My Experiment with experiment ID and email address
  • New comparison mode: All-against-Target in addition to All-against-All comparisons
    • Mark target for comparison
  • New consensus mode: Consensus/Best in addition to Consensus/Average
    • The best (smallest) values from the Standardised Distance Matrices/Vectors (SDM/SDV) from different methods are taken
    • A second matrix holds the method/measure names of the best values
  • Separate method for Standardisation, Combination, Clustering, Linearisation, and Deletion; depending on comparison mode
    • Linearisation produces input for the generation of ROC curves
06/12/07 New release: 8.5.2
  • Maintenance relaese including several bug fixes
  • "Standardised Similarity Matrix" (SSM) was renamed into "Standardised Distance Matrix" (SDM)
23/11/07 New release: 8.5
  • New similarity comparison method: Vorolign
  • New design with improved user interface and navigation
  • Customisable visualisation for contact maps as images and graphs
  • Customisable notification emails for finished experiments/tasks
  • Improved data security with authentication
  • Improved scheduling of all tasks
26/10/07 New Publication
  • "ProCKSI: a decision support system for Protein (Structure) Comparison, Knowledge, Similarity and Information"
    Barthel D., Hirst J.D. , Blazewicz J., Burke E.K., and Krasnogor N.,
    BMC Bioinformatics
    2007, 8:416
16/10/07 Major hardware and operating system upgrade
  • The ProCKSI cluster was extended to 5 compute nodes providing in total 14 cores.
  • The operating system was upgraded to Centos5 and and ProCKSI was reinstalled on all machines.